AnnData Import/ AnnData Manipulate not working?

title: AnnData Import/ AnnData Manipulate not working? box_type: tip layout: faq contributors: [nomadscientist, mtekman] redirect_from:

• /topics/transcriptomics/tutorials/scrna-scanpy-pbmc3k/faqs/anndata_not_working

This is a known issue, please do not use version 0.7.4 of the tool, and use version 0.6.2 instead. The Inspect AnnData tool should work fine however.

Switching tool versions

Still have questions?

Want to embed this snippet (FAQ) in your GTN Tutorial?

{% snippet  topics/single-cell/tutorials/scrna-scanpy-pbmc3k/faqs/anndata_not_working.md %}